Problems when using the ERA Interim data – in #10: INT2LM
in #10: INT2LM
Cookies disclaimer
Our site saves small pieces of text information (cookies) on your
device in order to verify your login. These cookies are essential
to provide access to resources on this website and it will not
work properly without.
Learn more
<p>
Dear all,
</p>
<p>
I met problems when i used the
<span class="caps">
ERA
</span>
Interim data to run the
<span class="caps">
COSMO
</span>
-
<span class="caps">
CLM
</span>
. I succeeded when i use the same run_int2lm by using the data of
<span class="caps">
NCEP
</span>
, but when i change the data into
<span class="caps">
ERA
</span>
Interim. I always got errors. The wrong message is like that
</p>
<p>
<span class="caps">
OPEN
</span>
: ncdf-file: /work/bb0884/chi/input/ext/domain2016032117044.nc
<br/>
00:
<span class="caps">
CLOSING
</span>
ncdf FILE
<br/>
00:
<span class="caps">
OPEN
</span>
: ncdf-file: /work/bb0884/chi/input/year1979/caf1979010100.nc
<br/>
00:
<span class="caps">
CLOSING
</span>
ncdf FILE
<br/>
00:
<span class="caps">
OPEN
</span>
: ncdf-file: /work/bb0884/chi/input/year1979/caf1979010100.nc
<br/>
18: forrtl: severe (174):
<span class="caps">
SIGSEGV
</span>
, segmentation fault occurred
<br/>
18: Image PC Routine Line Source
<br/>
18: int2lm.exe 0000000000884645 Unknown Unknown Unknown
<br/>
18: int2lm.exe 0000000000882407 Unknown Unknown Unknown
<br/>
18: int2lm.exe 000000000083C134 Unknown Unknown Unknown
<br/>
18: int2lm.exe 000000000083BF46 Unknown Unknown Unknown
<br/>
18: int2lm.exe 00000000007D5016 Unknown Unknown Unknown
<br/>
18: int2lm.exe 00000000007D8630 Unknown Unknown Unknown
<br/>
18: libpthread.so.0 00007F536B9BB7E0 Unknown Unknown Unknown
<br/>
18: int2lm.exe 000000000073BEB3 src_read_coarse_g 4195 src_read_coarse_grid.f90
<br/>
18: int2lm.exe 0000000000720DD3 src_read_coarse_g 1773 src_read_coarse_grid.f90
<br/>
18: int2lm.exe 00000000005315E1
<span class="caps">
MAIN
</span>
__ 265 int2lm_org.f90
<br/>
18: int2lm.exe 000000000041EB0E Unknown Unknown Unknown
<br/>
18: libc.so.6 00007F536B636D5D Unknown Unknown Unknown
<br/>
18: int2lm.exe 000000000041E9E9 Unknown Unknown Unknown
<br/>
00: forrtl: severe (174):
<span class="caps">
SIGSEGV
</span>
, segmentation fault occurred
<br/>
00: Image PC Routine Line Source
<br/>
00: int2lm.exe 0000000000884645 Unknown Unknown Unknown
<br/>
00: int2lm.exe 0000000000882407 Unknown Unknown Unknown
<br/>
00: int2lm.exe 000000000083C134 Unknown Unknown Unknown
</p>
<p>
The error message and run_int2lm script are in the attachment.
</p>
<p>
Thank you for your help.
</p>
<p>
Best
<br/>
Xiaoli
</p>
I met problems when i used the
ERA
Interim data to run the
COSMO
-
CLM
. I succeeded when i use the same run_int2lm by using the data of
NCEP
, but when i change the data into
ERA
Interim. I always got errors. The wrong message is like that
<p>
I deleted the east_add_in=1 and got the same segmentation error as before. I cannot comment out the lushift_in=.FALSE.,.FALSE., lvshift_in=.FALSE.,.FALSE. although. If i did this, i got the new error message.
<br/>
<strong>
——————————————————————————————
</strong>
<br/>
00: *
<span class="caps">
PROGRAM
</span>
<span class="caps">
TERMINATED
</span>
<span class="caps">
BECAUSE
</span>
OF
<span class="caps">
ERRORS
</span>
DETECTED
<br/>
00: * IN
<span class="caps">
ROUTINE
</span>
: int2lm_org
<br/>
00: *
<br/>
00: *
<span class="caps">
ERROR
</span>
<span class="caps">
CODE
</span>
is 1002
<br/>
00: *
<span class="caps">
ERROR
</span>
*** Wrong values occured in
<span class="caps">
NAMELIST
</span>
input ***
<br/>
00:
<strong>
——————————————————————————————
</strong>
<br/>
00: —————————————————————————————————————
<br/>
00:
<span class="caps">
MPI
</span>
_ABORT was invoked on rank 0 in communicator
<span class="caps">
MPI
</span>
_COMM_WORLD
<br/>
00: with errorcode 1002.
<br/>
00:
<br/>
00:
<span class="caps">
NOTE
</span>
: invoking
<span class="caps">
MPI
</span>
_ABORT causes Open
<span class="caps">
MPI
</span>
to kill all
<span class="caps">
MPI
</span>
processes.
<br/>
00: You may or may not see output from other processes, depending on
<br/>
00: exactly when Open
<span class="caps">
MPI
</span>
kills them.
<br/>
00: —————————————————————————————————————
</p>
<p>
Best
<br/>
Xiaoli
</p>
<p>
I deleted the east_add_in=1 and got the same segmentation error as before. I cannot comment out the lushift_in=.FALSE.,.FALSE., lvshift_in=.FALSE.,.FALSE. although. If i did this, i got the new error message.
<br/>
<strong>
——————————————————————————————
</strong>
<br/>
00: *
<span class="caps">
PROGRAM
</span>
<span class="caps">
TERMINATED
</span>
<span class="caps">
BECAUSE
</span>
OF
<span class="caps">
ERRORS
</span>
DETECTED
<br/>
00: * IN
<span class="caps">
ROUTINE
</span>
: int2lm_org
<br/>
00: *
<br/>
00: *
<span class="caps">
ERROR
</span>
<span class="caps">
CODE
</span>
is 1002
<br/>
00: *
<span class="caps">
ERROR
</span>
*** Wrong values occured in
<span class="caps">
NAMELIST
</span>
input ***
<br/>
00:
<strong>
——————————————————————————————
</strong>
<br/>
00: —————————————————————————————————————
<br/>
00:
<span class="caps">
MPI
</span>
_ABORT was invoked on rank 0 in communicator
<span class="caps">
MPI
</span>
_COMM_WORLD
<br/>
00: with errorcode 1002.
<br/>
00:
<br/>
00:
<span class="caps">
NOTE
</span>
: invoking
<span class="caps">
MPI
</span>
_ABORT causes Open
<span class="caps">
MPI
</span>
to kill all
<span class="caps">
MPI
</span>
processes.
<br/>
00: You may or may not see output from other processes, depending on
<br/>
00: exactly when Open
<span class="caps">
MPI
</span>
kills them.
<br/>
00: —————————————————————————————————————
</p>
<p>
Best
<br/>
Xiaoli
</p>
I deleted the east_add_in=1 and got the same segmentation error as before. I cannot comment out the lushift_in=.FALSE.,.FALSE., lvshift_in=.FALSE.,.FALSE. although. If i did this, i got the new error message.
——————————————————————————————
00: *
PROGRAM
TERMINATED
BECAUSE
OF
ERRORS
DETECTED
00: * IN
ROUTINE
: int2lm_org
00: *
00: *
ERROR
CODE
is 1002
00: *
ERROR
*** Wrong values occured in
NAMELIST
input ***
00:
——————————————————————————————
00: —————————————————————————————————————
00:
MPI
_ABORT was invoked on rank 0 in communicator
MPI
_COMM_WORLD
00: with errorcode 1002.
00:
00:
NOTE
: invoking
MPI
_ABORT causes Open
MPI
to kill all
MPI
processes.
00: You may or may not see output from other processes, depending on
00: exactly when Open
MPI
kills them.
00: —————————————————————————————————————
Problems when using the ERA Interim data
Dear all,
I met problems when i used the ERA Interim data to run the COSMO - CLM . I succeeded when i use the same run_int2lm by using the data of NCEP , but when i change the data into ERA Interim. I always got errors. The wrong message is like that
OPEN : ncdf-file: /work/bb0884/chi/input/ext/domain2016032117044.nc
00: CLOSING ncdf FILE
00: OPEN : ncdf-file: /work/bb0884/chi/input/year1979/caf1979010100.nc
00: CLOSING ncdf FILE
00: OPEN : ncdf-file: /work/bb0884/chi/input/year1979/caf1979010100.nc
18: forrtl: severe (174): SIGSEGV , segmentation fault occurred
18: Image PC Routine Line Source
18: int2lm.exe 0000000000884645 Unknown Unknown Unknown
18: int2lm.exe 0000000000882407 Unknown Unknown Unknown
18: int2lm.exe 000000000083C134 Unknown Unknown Unknown
18: int2lm.exe 000000000083BF46 Unknown Unknown Unknown
18: int2lm.exe 00000000007D5016 Unknown Unknown Unknown
18: int2lm.exe 00000000007D8630 Unknown Unknown Unknown
18: libpthread.so.0 00007F536B9BB7E0 Unknown Unknown Unknown
18: int2lm.exe 000000000073BEB3 src_read_coarse_g 4195 src_read_coarse_grid.f90
18: int2lm.exe 0000000000720DD3 src_read_coarse_g 1773 src_read_coarse_grid.f90
18: int2lm.exe 00000000005315E1 MAIN __ 265 int2lm_org.f90
18: int2lm.exe 000000000041EB0E Unknown Unknown Unknown
18: libc.so.6 00007F536B636D5D Unknown Unknown Unknown
18: int2lm.exe 000000000041E9E9 Unknown Unknown Unknown
00: forrtl: severe (174): SIGSEGV , segmentation fault occurred
00: Image PC Routine Line Source
00: int2lm.exe 0000000000884645 Unknown Unknown Unknown
00: int2lm.exe 0000000000882407 Unknown Unknown Unknown
00: int2lm.exe 000000000083C134 Unknown Unknown Unknown
The error message and run_int2lm script are in the attachment.
Thank you for your help.
Best
Xiaoli
This error is not very instructive, but if you set irefatm =1 in &LMGRID, it should work.
Cheers,
Merja
Thank you so much for your reply.
I setted the irefatm =1 in &LMGRID, but unfortunately it didn’t work. I just put the new error and one data file in the attachment.
OPEN : ncdf-file: /work/bb0884/chi/input/ext/domain2016032117044.nc
00: CLOSING ncdf FILE
00: OPEN : ncdf-file: /work/bb0884/chi/input/year1979/caf1979010100.nc
00: CLOSING ncdf FILE
00: reference_atmosphere: calculate t0, p0, … by averaging
07: reference_atmosphere: calculate t0, p0, … by averaging
17: reference_atmosphere: calculate t0, p0, … by averaging
11: reference_atmosphere: calculate t0, p0, … by averaging
21: reference_atmosphere: calculate t0, p0, … by averaging
23: reference_atmosphere: calculate t0, p0, … by averaging
08: reference_atmosphere: calculate t0, p0, … by averaging
15: reference_atmosphere: calculate t0, p0, … by averaging
16: reference_atmosphere: calculate t0, p0, … by averaging
01: reference_atmosphere: calculate t0, p0, … by averaging
19: reference_atmosphere: calculate t0, p0, … by averaging
02: reference_atmosphere: calculate t0, p0, … by averaging
05: reference_atmosphere: calculate t0, p0, … by averaging
04: reference_atmosphere: calculate t0, p0, … by averaging
09: reference_atmosphere: calculate t0, p0, … by averaging
10: reference_atmosphere: calculate t0, p0, … by averaging
18: reference_atmosphere: calculate t0, p0, … by averaging
13: reference_atmosphere: calculate t0, p0, … by averaging
20: reference_atmosphere: calculate t0, p0, … by averaging
12: reference_atmosphere: calculate t0, p0, … by averaging
22: reference_atmosphere: calculate t0, p0, … by averaging
06: reference_atmosphere: calculate t0, p0, … by averaging
14: reference_atmosphere: calculate t0, p0, … by averaging
03: reference_atmosphere: calculate t0, p0, … by averaging
00: OPEN : ncdf-file: /work/bb0884/chi/input/year1979/caf1979010100.nc
00: forrtl: severe (174): SIGSEGV , segmentation fault occurred
00: Image PC Routine Line Source
00: int2lm.exe 0000000000884645 Unknown Unknown Unknown
00: int2lm.exe 0000000000882407 Unknown Unknown Unknown
00: int2lm.exe 000000000083C134 Unknown Unknown Unknown
00: int2lm.exe 000000000083BF46 Unknown Unknown Unknown
00: int2lm.exe 00000000007D5016 Unknown Unknown Unknown
00: int2lm.exe 00000000007D8630 Unknown Unknown Unknown
00: libpthread.so.0 00007FB79BC787E0 Unknown Unknown Unknown
00: int2lm.exe 000000000073BEB3 Unknown Unknown Unknown
00: int2lm.exe 0000000000720DD3 src_read_coarse_g 1773 src_read_coarse_grid.f90
00: int2lm.exe 00000000005315E1 MAIN __ 265 int2lm_org.f90
00: int2lm.exe 000000000041EB0E Unknown Unknown Unknown
00: libc.so.6
00: 00007FB79B8F3D5D Unknown Unknown Unknown
00: int2lm.exe 000000000041E9E9 Unknown Unknown Unknown
01: forrtl: severe (174): SIGSEGV , segmentation fault occurred
01: Image PC Routine Line Source
01: int2lm.exe 0000000000884645 Unknown Unknown Unknown
01: int2lm.exe 0000000000882407 Unknown Unknown Unknown
01: int2lm.exe 000000000083C134 Unknown Unknown Unknown
01: int2lm.exe 000000000083BF46 Unknown Unknown Unknown
01: int2lm.exe 00000000007D5016 Unknown Unknown Unknown
01: int2lm.exe 00000000007D8630 Unknown Unknown Unknown
01: libpthread.so.0 00007F5ACCD927E0 Unknown Unknown Unknown
01: int2lm.exe 000000000073BEB3 Unknown Unknown Unknown
01: int2lm.exe 0000000000720DD3 src_read_coarse_g 1773 src_read_coarse_grid.f90
01: int2lm.exe 00000000005315E1 Unknown Unknown Unknown
01: int2lm.exe 000000000041EB0E Unknown Unknown Unknown
best
Xiaoli
You do not need east_add_in=1,
Cheers,
Merja
Also comment out lushift_in=.FALSE.,.FALSE., lvshift_in=.FALSE.,.FALSE.,
Cheers,
Merja
Also your startlat_tot = -7.89, startlon_tot = -11.89,
seem not to be correct.
Cheers,
Merja
I deleted the east_add_in=1 and got the same segmentation error as before. I cannot comment out the lushift_in=.FALSE.,.FALSE., lvshift_in=.FALSE.,.FALSE. although. If i did this, i got the new error message.
——————————————————————————————
00: * PROGRAM TERMINATED BECAUSE OF ERRORS DETECTED
00: * IN ROUTINE : int2lm_org
00: *
00: * ERROR CODE is 1002
00: * ERROR *** Wrong values occured in NAMELIST input ***
00: ——————————————————————————————
00: —————————————————————————————————————
00: MPI _ABORT was invoked on rank 0 in communicator MPI _COMM_WORLD
00: with errorcode 1002.
00:
00: NOTE : invoking MPI _ABORT causes Open MPI to kill all MPI processes.
00: You may or may not see output from other processes, depending on
00: exactly when Open MPI kills them.
00: —————————————————————————————————————
Best
Xiaoli
Please try
Thank you so much. It worked well.
Best
Xiaoli